Functional Analysis and Visualization for large scale Omics data
Functional Category
Functional Process
Pathway
Module
Kegg Orthology
Drawing Tree
Functional Tree : Menu
Input Data
Option
Visual normalization method
Select how to normalize the node's value on each functional layer
Set a domain range
%
Internal node calculation method
Select a method to calculate the node's value based on peripheral KO
Node value prioritization
Select whether you would like to prioritize the input or calculated value as the node's value
Background data: Metagenome
Select a background metagenomic data for enrichment analysis
Genomic Enrichment analysis
Select organism type
Select alternative hypothesis
Can only choose one type of background Data
Unknown organism type. Please check input file.
Multiple testing method
Select a statistical correction method for the result of enrichment analysis
Recenter node
Select a node to recenter the functional tree
Set coverage
Set a coverage value for module and pathway
%
%
Labeling for Top nodes
Select Labeling Color.
Select layer to add labeling.
Set range of value you would like add a label to.
Auto open KO over threshhold
Set range of value for KO nodes.
Any KO nodes within this range will auto open as you update mapping customization.
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Node Information
Node Information
| Name | |
| ID | |
| Definition | |
| Input | |
| Calculated | |
| Mapped | |
| Opacity | |
| Color |
Node Description
Path from root
Biological category
Biological prcess
KEGG Pathway
KEGG Module
KEGG Orthology